* error: failed to run repack @ 2019-06-11 11:39 Ali Alnubani 2019-06-11 19:24 ` Eric Wong 0 siblings, 1 reply; 4+ messages in thread From: Ali Alnubani @ 2019-06-11 11:39 UTC (permalink / raw) To: meta@public-inbox.org Hi, I keep seeing the following in my logs for multiple lists: timestamp public-inbox-watch[PID]: Auto packing the repository in background for optimum performance. timestamp public-inbox-watch[PID]: See "git help gc" for manual housekeeping. timestamp public-inbox-watch[PID]: error: The last gc run reported the following. Please correct the root cause timestamp public-inbox-watch[PID]: and remove path/to/repo.git/git/0.git/gc.log. timestamp public-inbox-watch[PID]: Automatic cleanup will not be performed until the file is removed. timestamp public-inbox-watch[PID]: fatal: Failed to write bitmap index. Packfile doesn't have full closure (object 817390f628f74a55c627f1ddab8a44aa029753a0 is missing) timestamp public-inbox-watch[PID]: error: failed to run repack Running 'git-fsck -full' in path/to/repo.git/git/0.git doesn't report any issues. I imported my archives using scripts/import_vger_from_mbox. Any clue? Also is it safe to attempt a manual git-gc? Thanks, Ali ^ permalink raw reply [flat|nested] 4+ messages in thread
* Re: error: failed to run repack 2019-06-11 11:39 error: failed to run repack Ali Alnubani @ 2019-06-11 19:24 ` Eric Wong 2019-06-12 13:05 ` Ali Alnubani 0 siblings, 1 reply; 4+ messages in thread From: Eric Wong @ 2019-06-11 19:24 UTC (permalink / raw) To: Ali Alnubani; +Cc: meta Ali Alnubani <alialnu@mellanox.com> wrote: > Hi, > > I keep seeing the following in my logs for multiple lists: > > timestamp public-inbox-watch[PID]: Auto packing the repository in background for optimum performance. > timestamp public-inbox-watch[PID]: See "git help gc" for manual housekeeping. > timestamp public-inbox-watch[PID]: error: The last gc run reported the following. Please correct the root cause > timestamp public-inbox-watch[PID]: and remove path/to/repo.git/git/0.git/gc.log. > timestamp public-inbox-watch[PID]: Automatic cleanup will not be performed until the file is removed. > timestamp public-inbox-watch[PID]: fatal: Failed to write bitmap index. Packfile doesn't have full closure (object 817390f628f74a55c627f1ddab8a44aa029753a0 is missing) Do you have a path/to/repo.git/git/0.git/objects/info/alternates ? Bitmaps won't work when packing a repo with alternates In other words, does 817390f628f74a55c627f1ddab8a44aa029753a0 exist in your 0.git, or somewhere else? The normal epoch repos (git/[0-9]+.git) aren't created with alternates by default; instead all.git uses git/[0-9]+.git as alternates. > timestamp public-inbox-watch[PID]: error: failed to run repack > > Running 'git-fsck -full' in path/to/repo.git/git/0.git doesn't report any issues. > > I imported my archives using scripts/import_vger_from_mbox. > > Any clue? Also is it safe to attempt a manual git-gc? You might have the same result. You can probably disable bitmaps in all.git/config and set it in a git repo that does have full closure. ^ permalink raw reply [flat|nested] 4+ messages in thread
* RE: error: failed to run repack 2019-06-11 19:24 ` Eric Wong @ 2019-06-12 13:05 ` Ali Alnubani 2019-06-12 17:02 ` Eric Wong 0 siblings, 1 reply; 4+ messages in thread From: Ali Alnubani @ 2019-06-12 13:05 UTC (permalink / raw) To: Eric Wong; +Cc: meta@public-inbox.org > -----Original Message----- > From: Eric Wong <e@80x24.org> > Sent: Tuesday, June 11, 2019 10:25 PM > To: Ali Alnubani <alialnu@mellanox.com> > Cc: meta@public-inbox.org > Subject: Re: error: failed to run repack > > Ali Alnubani <alialnu@mellanox.com> wrote: > > Hi, > > > > I keep seeing the following in my logs for multiple lists: > > > > timestamp public-inbox-watch[PID]: Auto packing the repository in > background for optimum performance. > > timestamp public-inbox-watch[PID]: See "git help gc" for manual > housekeeping. > > timestamp public-inbox-watch[PID]: error: The last gc run reported the > > following. Please correct the root cause timestamp public-inbox- > watch[PID]: and remove path/to/repo.git/git/0.git/gc.log. > > timestamp public-inbox-watch[PID]: Automatic cleanup will not be > performed until the file is removed. > > timestamp public-inbox-watch[PID]: fatal: Failed to write bitmap > > index. Packfile doesn't have full closure (object > > 817390f628f74a55c627f1ddab8a44aa029753a0 is missing) > > Do you have a path/to/repo.git/git/0.git/objects/info/alternates ? No: repo.git$ find . -name alternates ./all.git/objects/info/alternates > > Bitmaps won't work when packing a repo with alternates In other words, > does 817390f628f74a55c627f1ddab8a44aa029753a0 > exist in your 0.git, or somewhere else? This object doesn't exist in the filesystem: find . -name 817390f628f74a55c627f1ddab8a44aa029753a0 But does exist as a commit in repo.git/git/0.git. > > The normal epoch repos (git/[0-9]+.git) aren't created with alternates by > default; instead all.git uses git/[0-9]+.git as alternates. Yes, this is the case in my repos. > > > timestamp public-inbox-watch[PID]: error: failed to run repack > > > > Running 'git-fsck -full' in path/to/repo.git/git/0.git doesn't report any > issues. > > > > I imported my archives using scripts/import_vger_from_mbox. > > > > Any clue? Also is it safe to attempt a manual git-gc? > > You might have the same result. You can probably disable bitmaps in > all.git/config and set it in a git repo that does have full closure. `git -c gc.reflogExpire=now gc --prune=all` inside repo.git/git/0.git finished successfully. Counting objects: 255747, done. Delta compression using up to 2 threads. Compressing objects: 100% (92077/92077), done. Writing objects: 100% (255747/255747), done. Reusing bitmaps: 256, done. Selecting bitmap commits: 83010, done. Building bitmaps: 100% (321/321), done. Total 255747 (delta 84903), reused 237858 (delta 78421) repo.git/git/0.git$ git count-objects -Hv count: 0 size: 0 bytes in-pack: 255747 packs: 1 size-pack: 121.41 MiB prune-packable: 0 garbage: 0 size-garbage: 0 bytes I deleted the file gc.log afterwards. I will keep monitoring if gc fails and the file is created again. Thanks, Ali ^ permalink raw reply [flat|nested] 4+ messages in thread
* Re: error: failed to run repack 2019-06-12 13:05 ` Ali Alnubani @ 2019-06-12 17:02 ` Eric Wong 0 siblings, 0 replies; 4+ messages in thread From: Eric Wong @ 2019-06-12 17:02 UTC (permalink / raw) To: Ali Alnubani; +Cc: meta Ali Alnubani <alialnu@mellanox.com> wrote: > > -----Original Message----- > > From: Eric Wong <e@80x24.org> > > Sent: Tuesday, June 11, 2019 10:25 PM > > To: Ali Alnubani <alialnu@mellanox.com> > > Cc: meta@public-inbox.org > > Subject: Re: error: failed to run repack > > > > Ali Alnubani <alialnu@mellanox.com> wrote: > > > Hi, > > > > > > I keep seeing the following in my logs for multiple lists: > > > > > > timestamp public-inbox-watch[PID]: Auto packing the repository in > > background for optimum performance. > > > timestamp public-inbox-watch[PID]: See "git help gc" for manual > > housekeeping. > > > timestamp public-inbox-watch[PID]: error: The last gc run reported the > > > following. Please correct the root cause timestamp public-inbox- > > watch[PID]: and remove path/to/repo.git/git/0.git/gc.log. > > > timestamp public-inbox-watch[PID]: Automatic cleanup will not be > > performed until the file is removed. > > > timestamp public-inbox-watch[PID]: fatal: Failed to write bitmap > > > index. Packfile doesn't have full closure (object > > > 817390f628f74a55c627f1ddab8a44aa029753a0 is missing) > > > > Do you have a path/to/repo.git/git/0.git/objects/info/alternates ? > No: > repo.git$ find . -name alternates > ./all.git/objects/info/alternates OK, thanks for that followup. I wonder if there's something else strange going on; or a git bug... > > Bitmaps won't work when packing a repo with alternates In other words, > > does 817390f628f74a55c627f1ddab8a44aa029753a0 > > exist in your 0.git, or somewhere else? > This object doesn't exist in the filesystem: > find . -name 817390f628f74a55c627f1ddab8a44aa029753a0 > But does exist as a commit in repo.git/git/0.git. Erm, yeah, I just meant if it was in a pack somewhere, not a loose object. Did you have any crashes or failed fast-import processes? > > The normal epoch repos (git/[0-9]+.git) aren't created with alternates by > > default; instead all.git uses git/[0-9]+.git as alternates. > Yes, this is the case in my repos. > > > > > timestamp public-inbox-watch[PID]: error: failed to run repack > > > > > > Running 'git-fsck -full' in path/to/repo.git/git/0.git doesn't report any > > issues. > > > > > > I imported my archives using scripts/import_vger_from_mbox. > > > > > > Any clue? Also is it safe to attempt a manual git-gc? > > > > You might have the same result. You can probably disable bitmaps in > > all.git/config and set it in a git repo that does have full closure. > > `git -c gc.reflogExpire=now gc --prune=all` inside repo.git/git/0.git finished successfully. > Counting objects: 255747, done. > Delta compression using up to 2 threads. > Compressing objects: 100% (92077/92077), done. > Writing objects: 100% (255747/255747), done. > Reusing bitmaps: 256, done. > Selecting bitmap commits: 83010, done. > Building bitmaps: 100% (321/321), done. > Total 255747 (delta 84903), reused 237858 (delta 78421) > > repo.git/git/0.git$ git count-objects -Hv > count: 0 > size: 0 bytes > in-pack: 255747 > packs: 1 > size-pack: 121.41 MiB > prune-packable: 0 > garbage: 0 > size-garbage: 0 bytes > > I deleted the file gc.log afterwards. I will keep monitoring > if gc fails and the file is created again. OK, so everything works for now and I guess it's not easily reproducible anymore? Did the gc+prune expire commit 817390f628f74a55c627f1ddab8a44aa029753a0 ? I'm also wondering if you used the new public-inbox-edit or public-inbox-purge. In the future, it would also be good to note the git version in use and also to Cc: git@vger.kernel.org ^ permalink raw reply [flat|nested] 4+ messages in thread
end of thread, other threads:[~2019-06-12 17:02 UTC | newest] Thread overview: 4+ messages (download: mbox.gz / follow: Atom feed) -- links below jump to the message on this page -- 2019-06-11 11:39 error: failed to run repack Ali Alnubani 2019-06-11 19:24 ` Eric Wong 2019-06-12 13:05 ` Ali Alnubani 2019-06-12 17:02 ` Eric Wong
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