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From: Derrick Stolee <stolee@gmail.com>
To: Jakub Narebski <jnareb@gmail.com>,
	Derrick Stolee <dstolee@microsoft.com>
Cc: "git@vger.kernel.org" <git@vger.kernel.org>,
	"gitster@pobox.com" <gitster@pobox.com>,
	"avarab@gmail.com" <avarab@gmail.com>,
	"marten.agren@gmail.com" <marten.agren@gmail.com>,
	"peff@peff.net" <peff@peff.net>
Subject: Re: [PATCH v3 11/20] commit-graph: verify root tree OIDs
Date: Thu, 31 May 2018 09:16:59 -0400	[thread overview]
Message-ID: <d59f5723-7fb6-56d6-af2b-b8263cfdf354@gmail.com> (raw)
In-Reply-To: <86zi0gvl1h.fsf@gmail.com>

On 5/30/2018 6:24 PM, Jakub Narebski wrote:
> Derrick Stolee <dstolee@microsoft.com> writes:
>
>> The 'verify' subcommand must compare the commit content parsed from the
>> commit-graph and compare it against the content in the object database.
> You have "compare" twice in the above sentence.
>
>> Use lookup_commit() and parse_commit_in_graph_one() to parse the commits
>> from the graph and compare against a commit that is loaded separately
>> and parsed directly from the object database.
> All right, that looks like a nice extension of what was done in previous
> patch.  We want to check that cache (serialized commit graph) matches
> reality (object database).
>
>> Add checks for the root tree OID.
> All right; isn't it that now we check almost all information from
> commit-graph that hs match in object database (with exception of commit
> parents, I think).
>
>> Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
>> ---
>>   commit-graph.c          | 17 ++++++++++++++++-
>>   t/t5318-commit-graph.sh |  7 +++++++
>>   2 files changed, 23 insertions(+), 1 deletion(-)
>>
>> diff --git a/commit-graph.c b/commit-graph.c
>> index 0420ebcd87..19ea369fc6 100644
>> --- a/commit-graph.c
>> +++ b/commit-graph.c
>> @@ -880,6 +880,8 @@ int verify_commit_graph(struct commit_graph *g)
>>   		return verify_commit_graph_error;
> NOTE: we will be checking Commit Data chunk; I think it would be good
> idea to verify that size of Commit Data chunk matches (N * (H + 16) bytes)
> that format gives us, so that we don't accidentally red outside of
> memory if something got screwed up (like number of commits being wrong,
> or file truncated).

This is actually how we calculate 'num_commits' during 
load_commit_graph_one():

     if (last_chunk_id == GRAPH_CHUNKID_OIDLOOKUP)
     {
         graph->num_commits = (chunk_offset - last_chunk_offset)
                              / graph->hash_len;
     }

So, if the chunk doesn't match N*(H+16), we detect this because 
FANOUT[255] != N.

(There is one caveat here: (chunk_offset - last_chunk_offset) may not be 
a multiple of hash_len, and "accidentally" truncate to N in the 
division. I'll add more careful checks for this.)

We also check out-of-bounds offsets in that method.

>
>>   
>>   	for (i = 0; i < g->num_commits; i++) {
>> +		struct commit *graph_commit;
>> +
>>   		hashcpy(cur_oid.hash, g->chunk_oid_lookup + g->hash_len * i);
>>   
>>   		if (i && oidcmp(&prev_oid, &cur_oid) >= 0)
>> @@ -897,6 +899,11 @@ int verify_commit_graph(struct commit_graph *g)
>>   
>>   			cur_fanout_pos++;
>>   		}
>> +
>> +		graph_commit = lookup_commit(&cur_oid);
> So now I see why we add all commits to memory (to hash structure).
>
>> +		if (!parse_commit_in_graph_one(g, graph_commit))
>> +			graph_report("failed to parse %s from commit-graph",
>> +				     oid_to_hex(&cur_oid));
> All right, this verifies that commit in OID Lookup chunk has parse-able
> data in Commit Data chunk, isn't it?
>
>>   	}
>>   
>>   	while (cur_fanout_pos < 256) {
>> @@ -913,16 +920,24 @@ int verify_commit_graph(struct commit_graph *g)
>>   		return verify_commit_graph_error;
>>   
>>   	for (i = 0; i < g->num_commits; i++) {
>> -		struct commit *odb_commit;
>> +		struct commit *graph_commit, *odb_commit;
>>   
>>   		hashcpy(cur_oid.hash, g->chunk_oid_lookup + g->hash_len * i);
>>   
>> +		graph_commit = lookup_commit(&cur_oid);
>>   		odb_commit = (struct commit *)create_object(cur_oid.hash, alloc_commit_node());
> All right, so we have commit data from graph, and commit data from the
> object database.
>
>>   		if (parse_commit_internal(odb_commit, 0, 0)) {
>>   			graph_report("failed to parse %s from object database",
>>   				     oid_to_hex(&cur_oid));
>>   			continue;
>>   		}
>> +
>> +		if (oidcmp(&get_commit_tree_in_graph_one(g, graph_commit)->object.oid,
>> +			   get_commit_tree_oid(odb_commit)))
>> +			graph_report("root tree OID for commit %s in commit-graph is %s != %s",
>> +				     oid_to_hex(&cur_oid),
>> +				     oid_to_hex(get_commit_tree_oid(graph_commit)),
>> +				     oid_to_hex(get_commit_tree_oid(odb_commit)));
> Maybe explicitly say that it doesn't match the value from the object
> database; OTOH this may be too verbose.
>
>>   	}
>>   
>>   	return verify_commit_graph_error;
>> diff --git a/t/t5318-commit-graph.sh b/t/t5318-commit-graph.sh
>> index 996a016239..21cc8e82f3 100755
>> --- a/t/t5318-commit-graph.sh
>> +++ b/t/t5318-commit-graph.sh
>> @@ -267,6 +267,8 @@ GRAPH_BYTE_FANOUT2=`expr $GRAPH_FANOUT_OFFSET + 4 \* 255`
>>   GRAPH_OID_LOOKUP_OFFSET=`expr $GRAPH_FANOUT_OFFSET + 4 \* 256`
>>   GRAPH_BYTE_OID_LOOKUP_ORDER=`expr $GRAPH_OID_LOOKUP_OFFSET + $HASH_LEN \* 8`
>>   GRAPH_BYTE_OID_LOOKUP_MISSING=`expr $GRAPH_OID_LOOKUP_OFFSET + $HASH_LEN \* 4 + 10`
>> +GRAPH_COMMIT_DATA_OFFSET=`expr $GRAPH_OID_LOOKUP_OFFSET + $HASH_LEN \* $NUM_COMMITS`
>> +GRAPH_BYTE_COMMIT_TREE=$GRAPH_COMMIT_DATA_OFFSET
> All right, so the first is entry into record in Commit Data chunk, and
> the latter points into tree entry in this record -- which entry is first
> field:
>
>    Commit Data (ID: {'C', 'G', 'E', 'T' }) (N * (H + 16) bytes)
>      * The first H bytes are for the OID of the root tree.
>
>>   
>>   # usage: corrupt_graph_and_verify <position> <data> <string>
>>   # Manipulates the commit-graph file at the position
>> @@ -341,4 +343,9 @@ test_expect_success 'detect OID not in object database' '
>>   		"from object database"
>>   '
>>   
>> +test_expect_success 'detect incorrect tree OID' '
>> +	corrupt_graph_and_verify $GRAPH_BYTE_COMMIT_TREE "\01" \
>> +		"root tree OID for commit"
>> +'
> All right.
>
> I wonder if we can create a test for first check added (that Commit
> Graph data parses correctly), that is the one with the following error
> message:
>
>    "failed to parse <OID> from commit-graph file".
>
>> +
>>   test_done
> Regards,


  reply	other threads:[~2018-05-31 13:17 UTC|newest]

Thread overview: 149+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2018-04-17 18:10 [RFC PATCH 00/12] Integrate commit-graph into 'fsck' and 'gc' Derrick Stolee
2018-04-17 18:10 ` [RFC PATCH 01/12] fixup! commit-graph: always load commit-graph information Derrick Stolee
2018-04-17 18:10 ` [RFC PATCH 03/12] commit-graph: check file header information Derrick Stolee
2018-04-19 15:58   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 02/12] commit-graph: add 'check' subcommand Derrick Stolee
2018-04-19 13:24   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 04/12] commit-graph: parse commit from chosen graph Derrick Stolee
2018-04-19 17:21   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 05/12] commit-graph: check fanout and lookup table Derrick Stolee
2018-04-20  7:27   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 06/12] commit: force commit to parse from object database Derrick Stolee
2018-04-20 12:13   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 07/12] commit-graph: load a root tree from specific graph Derrick Stolee
2018-04-20 12:18   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 08/12] commit-graph: verify commit contents against odb Derrick Stolee
2018-04-20 16:47   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 10/12] commit-graph: add '--reachable' option Derrick Stolee
2018-04-20 17:17   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 09/12] fsck: check commit-graph Derrick Stolee
2018-04-20 16:59   ` Jakub Narebski
2018-04-17 18:10 ` [RFC PATCH 11/12] gc: automatically write commit-graph files Derrick Stolee
2018-04-20 17:34   ` Jakub Narebski
2018-04-20 18:33     ` Ævar Arnfjörð Bjarmason
2018-04-17 18:10 ` [RFC PATCH 12/12] commit-graph: update design document Derrick Stolee
2018-04-20 19:10   ` Jakub Narebski
2018-04-17 18:50 ` [RFC PATCH 00/12] Integrate commit-graph into 'fsck' and 'gc' Derrick Stolee
2018-05-10 17:34 ` [PATCH 00/12] Integrate commit-graph into fsck, gc, and fetch Derrick Stolee
2018-05-10 17:34   ` [PATCH 01/12] commit-graph: add 'verify' subcommand Derrick Stolee
2018-05-10 18:15     ` Martin Ågren
2018-05-10 17:34   ` [PATCH 02/12] commit-graph: verify file header information Derrick Stolee
2018-05-10 18:21     ` Martin Ågren
2018-05-10 17:34   ` [PATCH 03/12] commit-graph: parse commit from chosen graph Derrick Stolee
2018-05-10 17:34   ` [PATCH 04/12] commit-graph: verify fanout and lookup table Derrick Stolee
2018-05-10 18:29     ` Martin Ågren
2018-05-11 15:17       ` Derrick Stolee
2018-05-10 17:34   ` [PATCH 05/12] commit: force commit to parse from object database Derrick Stolee
2018-05-10 17:34   ` [PATCH 06/12] commit-graph: load a root tree from specific graph Derrick Stolee
2018-05-10 17:34   ` [PATCH 07/12] commit-graph: verify commit contents against odb Derrick Stolee
2018-05-10 17:34   ` [PATCH 08/12] fsck: verify commit-graph Derrick Stolee
2018-05-10 17:34   ` [PATCH 09/12] commit-graph: add '--reachable' option Derrick Stolee
2018-05-10 17:34   ` [PATCH 10/12] gc: automatically write commit-graph files Derrick Stolee
2018-05-10 17:34   ` [PATCH 11/12] fetch: compute commit-graph by default Derrick Stolee
2018-05-10 17:34   ` [PATCH 12/12] commit-graph: update design document Derrick Stolee
2018-05-10 19:05   ` [PATCH 00/12] Integrate commit-graph into fsck, gc, and fetch Martin Ågren
2018-05-10 19:22     ` Stefan Beller
2018-05-11 17:23       ` Derrick Stolee
2018-05-11 17:30         ` Martin Ågren
2018-05-10 19:17   ` Ævar Arnfjörð Bjarmason
2018-05-11 17:23     ` Derrick Stolee
2018-05-11 21:15   ` [PATCH v2 00/12] Integrate commit-graph into fsck and gc Derrick Stolee
2018-05-11 21:15     ` [PATCH v2 01/12] commit-graph: add 'verify' subcommand Derrick Stolee
2018-05-12 13:31       ` Martin Ågren
2018-05-14 13:27         ` Derrick Stolee
2018-05-20 12:10       ` Jakub Narebski
2018-05-11 21:15     ` [PATCH v2 02/12] commit-graph: verify file header information Derrick Stolee
2018-05-12 13:35       ` Martin Ågren
2018-05-14 13:31         ` Derrick Stolee
2018-05-20 20:00       ` Jakub Narebski
2018-05-11 21:15     ` [PATCH v2 03/12] commit-graph: test that 'verify' finds corruption Derrick Stolee
2018-05-12 13:43       ` Martin Ågren
2018-05-21 18:53       ` Jakub Narebski
2018-05-24 16:28         ` Derrick Stolee
2018-05-11 21:15     ` [PATCH v2 04/12] commit-graph: parse commit from chosen graph Derrick Stolee
2018-05-12 20:50       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 05/12] commit-graph: verify fanout and lookup table Derrick Stolee
2018-05-11 21:15     ` [PATCH v2 06/12] commit: force commit to parse from object database Derrick Stolee
2018-05-12 20:54       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 07/12] commit-graph: load a root tree from specific graph Derrick Stolee
2018-05-12 20:55       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 08/12] commit-graph: verify commit contents against odb Derrick Stolee
2018-05-12 21:17       ` Martin Ågren
2018-05-14 13:44         ` Derrick Stolee
2018-05-15 21:12       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 09/12] fsck: verify commit-graph Derrick Stolee
2018-05-17 18:13       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 11/12] gc: automatically write commit-graph files Derrick Stolee
2018-05-17 18:20       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 10/12] commit-graph: add '--reachable' option Derrick Stolee
2018-05-17 18:16       ` Martin Ågren
2018-05-11 21:15     ` [PATCH v2 12/12] commit-graph: update design document Derrick Stolee
2018-05-24 16:25     ` [PATCH v3 00/20] Integrate commit-graph into 'fsck' and 'gc' Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 01/20] commit-graph: UNLEAK before die() Derrick Stolee
2018-05-24 22:47         ` Stefan Beller
2018-05-25  0:08           ` Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 02/20] commit-graph: fix GRAPH_MIN_SIZE Derrick Stolee
2018-05-26 18:46         ` Jakub Narebski
2018-05-26 20:30           ` brian m. carlson
2018-06-02 19:43             ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 03/20] commit-graph: parse commit from chosen graph Derrick Stolee
2018-05-27 10:23         ` Jakub Narebski
2018-05-29 12:31           ` Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 04/20] commit: force commit to parse from object database Derrick Stolee
2018-05-27 18:04         ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 05/20] commit-graph: load a root tree from specific graph Derrick Stolee
2018-05-27 19:12         ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 06/20] commit-graph: add 'verify' subcommand Derrick Stolee
2018-05-27 22:55         ` Jakub Narebski
2018-05-30 16:07           ` Derrick Stolee
2018-06-02 21:19             ` Jakub Narebski
2018-06-04 11:30               ` Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 07/20] commit-graph: verify catches corrupt signature Derrick Stolee
2018-05-28 14:05         ` Jakub Narebski
2018-05-29 12:43           ` Derrick Stolee
2018-06-02 22:30             ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 08/20] commit-graph: verify required chunks are present Derrick Stolee
2018-05-28 17:11         ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 09/20] commit-graph: verify corrupt OID fanout and lookup Derrick Stolee
2018-05-30 13:34         ` Jakub Narebski
2018-05-30 16:18           ` Derrick Stolee
2018-06-02  4:38         ` Duy Nguyen
2018-06-04 11:32           ` Derrick Stolee
2018-06-04 14:42             ` Duy Nguyen
2018-05-24 16:25       ` [PATCH v3 10/20] commit-graph: verify objects exist Derrick Stolee
2018-05-30 19:22         ` Jakub Narebski
2018-05-31 12:53           ` Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 11/20] commit-graph: verify root tree OIDs Derrick Stolee
2018-05-30 22:24         ` Jakub Narebski
2018-05-31 13:16           ` Derrick Stolee [this message]
2018-06-02 22:50             ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 12/20] commit-graph: verify parent list Derrick Stolee
2018-06-01 23:21         ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 13/20] commit-graph: verify generation number Derrick Stolee
2018-06-02 12:23         ` Jakub Narebski
2018-06-04 11:47           ` Derrick Stolee
2018-05-24 16:25       ` [PATCH v3 14/20] commit-graph: verify commit date Derrick Stolee
2018-06-02 12:29         ` Jakub Narebski
2018-05-24 16:25       ` [PATCH v3 15/20] commit-graph: test for corrupted octopus edge Derrick Stolee
2018-06-02 12:39         ` Jakub Narebski
2018-06-04 13:08           ` Derrick Stolee
2018-05-24 16:26       ` [PATCH v3 16/20] commit-graph: verify contents match checksum Derrick Stolee
2018-05-30 12:35         ` SZEDER Gábor
2018-06-02 15:52         ` Jakub Narebski
2018-06-04 11:55           ` Derrick Stolee
2018-05-24 16:26       ` [PATCH v3 17/20] fsck: verify commit-graph Derrick Stolee
2018-06-02 16:17         ` Jakub Narebski
2018-06-04 11:59           ` Derrick Stolee
2018-05-24 16:26       ` [PATCH v3 18/20] commit-graph: add '--reachable' option Derrick Stolee
2018-06-02 17:34         ` Jakub Narebski
2018-06-04 12:44           ` Derrick Stolee
2018-05-24 16:26       ` [PATCH v3 19/20] gc: automatically write commit-graph files Derrick Stolee
2018-06-02 18:03         ` Jakub Narebski
2018-06-04 12:51           ` Derrick Stolee
2018-05-24 16:26       ` [PATCH v3 20/20] commit-graph: update design document Derrick Stolee
2018-06-02 18:27         ` Jakub Narebski
2018-05-24 21:15       ` [PATCH v3 00/20] Integrate commit-graph into 'fsck' and 'gc' Ævar Arnfjörð Bjarmason
2018-05-25  4:11       ` Junio C Hamano
2018-05-29  4:27       ` Junio C Hamano
2018-05-29 12:37         ` Derrick Stolee
2018-05-29 13:41           ` Junio C Hamano

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